Construct: shRNA TRCN0000098494

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_027157.1-401s1c1
DNA Barcode:
CTGTTGCTGCTACTGCTGCTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Krtap1-5 (69664)
Gene Description:
keratin associated protein 1-5
Transcript:
RefSeq NM_027157.1 (NON-CURRENT)
Match location:
Position 401 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000098494)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTGTTGCTGCTACTGCTGCTA
Hairpin Sequence:
5'-CCGG-CTGTTGCTGCTACTGCTGCTA-CTCGAG-TAGCAGCAGTAGCAGCAACAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTGTTGCTGCTACTGCTGCTACTCGAGTAGCAGCAGTAGCAGCAACAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTGTTGCTGCTACTGCTGCTACTCGAGTAGCAGCAGTAGCAGCAACAG-3'

Other clones with same target sequence:

(none)