Construct: shRNA TRCN0000098511

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_198683.1-1279s1c1
DNA Barcode:
CGTATTCTGGTATCCAGCAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Celf1 (13046)
Gene Description:
CUGBP, Elav-like family member 1
Transcript:
RefSeq NM_198683.1 (NON-CURRENT)
Match location:
Position 1279 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000098511)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGTATTCTGGTATCCAGCAAT
Hairpin Sequence:
5'-CCGG-CGTATTCTGGTATCCAGCAAT-CTCGAG-ATTGCTGGATACCAGAATACG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGTATTCTGGTATCCAGCAATCTCGAGATTGCTGGATACCAGAATACGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGTATTCTGGTATCCAGCAATCTCGAGATTGCTGGATACCAGAATACG-3'

Other clones with same target sequence:

  1. TRCN0000326780