Construct: shRNA TRCN0000099934

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_178247.2-439s1c1
DNA Barcode:
CTGTAGACACTGTCGACATTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Dppa1 (347708)
Gene Description:
developmental pluripotency associated 1
Transcript:
RefSeq NM_178247.2 (NON-CURRENT)
Match location:
Position 439 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000099934)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTGTAGACACTGTCGACATTA
Hairpin Sequence:
5'-CCGG-CTGTAGACACTGTCGACATTA-CTCGAG-TAATGTCGACAGTGTCTACAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTGTAGACACTGTCGACATTACTCGAGTAATGTCGACAGTGTCTACAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTGTAGACACTGTCGACATTACTCGAGTAATGTCGACAGTGTCTACAG-3'

Other clones with same target sequence:

(none)