Construct: shRNA TRCN0000100341

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_017382.2-461s1c1
DNA Barcode:
GAGAGATCATGCTGATAGTAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Rab11a (53869)
Gene Description:
RAB11A, member RAS oncogene family
Transcript:
RefSeq NM_017382.2 (NON-CURRENT)
Match location:
Position 461 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000100341)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAGAGATCATGCTGATAGTAA
Hairpin Sequence:
5'-CCGG-GAGAGATCATGCTGATAGTAA-CTCGAG-TTACTATCAGCATGATCTCTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAGAGATCATGCTGATAGTAACTCGAGTTACTATCAGCATGATCTCTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAGAGATCATGCTGATAGTAACTCGAGTTACTATCAGCATGATCTCTC-3'

Other clones with same target sequence:

  1. TRCN0000324936