Construct: shRNA TRCN0000100609

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_177390.2-1098s1c1
DNA Barcode:
GCCGCTTATTGAGAATGGCAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Myo1d (338367)
Gene Description:
myosin ID
Transcript:
RefSeq NM_177390.2 (NON-CURRENT)
Match location:
Position 1098 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000100609)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCGCTTATTGAGAATGGCAA
Hairpin Sequence:
5'-CCGG-GCCGCTTATTGAGAATGGCAA-CTCGAG-TTGCCATTCTCAATAAGCGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCGCTTATTGAGAATGGCAACTCGAGTTGCCATTCTCAATAAGCGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCGCTTATTGAGAATGGCAACTCGAGTTGCCATTCTCAATAAGCGGC-3'

Other clones with same target sequence:

(none)