Construct: shRNA TRCN0000100679

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_026343.1-539s1c1
DNA Barcode:
TCAGAGTCTGACTCAGATATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Stx17 (67727)
Gene Description:
syntaxin 17
Transcript:
RefSeq NM_026343.1 (NON-CURRENT)
Match location:
Position 539 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000100679)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TCAGAGTCTGACTCAGATATA
Hairpin Sequence:
5'-CCGG-TCAGAGTCTGACTCAGATATA-CTCGAG-TATATCTGAGTCAGACTCTGA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTCAGAGTCTGACTCAGATATACTCGAGTATATCTGAGTCAGACTCTGATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATCAGAGTCTGACTCAGATATACTCGAGTATATCTGAGTCAGACTCTGA-3'

Other clones with same target sequence:

(none)