Construct: shRNA TRCN0000101207

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_026141.2-1066s1c1
DNA Barcode:
CCAGCCAATTTGGTTCTGAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ppil4 (67418)
Gene Description:
peptidylprolyl isomerase (cyclophilin)-like 4
Transcript:
RefSeq NM_026141.2 (NON-CURRENT)
Match location:
Position 1066 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000101207)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGCCAATTTGGTTCTGAAA
Hairpin Sequence:
5'-CCGG-CCAGCCAATTTGGTTCTGAAA-CTCGAG-TTTCAGAACCAAATTGGCTGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGCCAATTTGGTTCTGAAACTCGAGTTTCAGAACCAAATTGGCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGCCAATTTGGTTCTGAAACTCGAGTTTCAGAACCAAATTGGCTGG-3'

Other clones with same target sequence:

  1. TRCN0000317659