Construct: shRNA TRCN0000101673
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_177195.2-227s1c1
- DNA Barcode:
- CGGACAATTCCATCAAGACAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Atp8b5 (320571)
- Gene Description:
- ATPase, class I, type 8B, member 5
- Transcript:
- RefSeq NM_177195.2 (NON-CURRENT)
- Match location:
- Position 227 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000101673)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CGGACAATTCCATCAAGACAT
- Hairpin Sequence:
-
5'-CCGG-CGGACAATTCCATCAAGACAT-CTCGAG-ATGTCTTGATGGAATTGTCCG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCGGACAATTCCATCAAGACATCTCGAGATGTCTTGATGGAATTGTCCGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACGGACAATTCCATCAAGACATCTCGAGATGTCTTGATGGAATTGTCCG-3'
Other clones with same target sequence:
(none)
