Construct: shRNA TRCN0000102343

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_053104.3-927s1c1
DNA Barcode:
CGACTACATGTCTCTAATATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Rbfox2 (93686)
Gene Description:
RNA binding protein, fox-1 homolog (C. elegans) 2
Transcript:
RefSeq NM_053104.3 (NON-CURRENT)
Match location:
Position 927 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000102343)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGACTACATGTCTCTAATATT
Hairpin Sequence:
5'-CCGG-CGACTACATGTCTCTAATATT-CTCGAG-AATATTAGAGACATGTAGTCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGACTACATGTCTCTAATATTCTCGAGAATATTAGAGACATGTAGTCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGACTACATGTCTCTAATATTCTCGAGAATATTAGAGACATGTAGTCG-3'

Other clones with same target sequence:

(none)