Construct: shRNA TRCN0000103126

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011828.2-1202s1c1
DNA Barcode:
GCAGTCTGACATTTGGAAGAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hs2st1 (23908)
Gene Description:
heparan sulfate 2-O-sulfotransferase 1
Transcript:
RefSeq NM_011828.2 (NON-CURRENT)
Match location:
Position 1202 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000103126)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGTCTGACATTTGGAAGAT
Hairpin Sequence:
5'-CCGG-GCAGTCTGACATTTGGAAGAT-CTCGAG-ATCTTCCAAATGTCAGACTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGTCTGACATTTGGAAGATCTCGAGATCTTCCAAATGTCAGACTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGTCTGACATTTGGAAGATCTCGAGATCTTCCAAATGTCAGACTGC-3'

Other clones with same target sequence:

(none)