Construct: shRNA TRCN0000103405

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001013762.1-1219s1c1
DNA Barcode:
GCCATCATCTTTGTTTAGTTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Gm4952 (240549)
Gene Description:
predicted gene 4952
Transcript:
RefSeq NM_001013762.1 (NON-CURRENT)
Match location:
Position 1219 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000103405)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCATCATCTTTGTTTAGTTT
Hairpin Sequence:
5'-CCGG-GCCATCATCTTTGTTTAGTTT-CTCGAG-AAACTAAACAAAGATGATGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCATCATCTTTGTTTAGTTTCTCGAGAAACTAAACAAAGATGATGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCATCATCTTTGTTTAGTTTCTCGAGAAACTAAACAAAGATGATGGC-3'

Other clones with same target sequence:

(none)