Construct: shRNA TRCN0000104030
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_028074.2-3058s1c1
- DNA Barcode:
- GCGTCGTCAGTCGTCTTTAAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Ddx42 (72047)
- Gene Description:
- DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
- Transcript:
- RefSeq NM_028074.2 (NON-CURRENT)
- Match location:
- Position 3058 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000104030)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCGTCGTCAGTCGTCTTTAAT
- Hairpin Sequence:
-
5'-CCGG-GCGTCGTCAGTCGTCTTTAAT-CTCGAG-ATTAAAGACGACTGACGACGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCGTCGTCAGTCGTCTTTAATCTCGAGATTAAAGACGACTGACGACGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCGTCGTCAGTCGTCTTTAATCTCGAGATTAAAGACGACTGACGACGC-3'
Other clones with same target sequence:
-
TRCN0000309020
