Construct: shRNA TRCN0000105711

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_028035.2-687s1c1
DNA Barcode:
GCCATTCACAAGTTTGCTTTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Snx10 (71982)
Gene Description:
sorting nexin 10
Transcript:
RefSeq NM_028035.2 (NON-CURRENT)
Match location:
Position 687 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000105711)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCATTCACAAGTTTGCTTTA
Hairpin Sequence:
5'-CCGG-GCCATTCACAAGTTTGCTTTA-CTCGAG-TAAAGCAAACTTGTGAATGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCATTCACAAGTTTGCTTTACTCGAGTAAAGCAAACTTGTGAATGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCATTCACAAGTTTGCTTTACTCGAGTAAAGCAAACTTGTGAATGGC-3'

Other clones with same target sequence:

(none)