Construct: shRNA TRCN0000105761

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016853.1-1117s1c1
DNA Barcode:
GCCAACTTTGTTCAGAGAGTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Stac (20840)
Gene Description:
src homology three (SH3) and cysteine rich domain
Transcript:
RefSeq NM_016853.1 (NON-CURRENT)
Match location:
Position 1117 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000105761)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCAACTTTGTTCAGAGAGTA
Hairpin Sequence:
5'-CCGG-GCCAACTTTGTTCAGAGAGTA-CTCGAG-TACTCTCTGAACAAAGTTGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCAACTTTGTTCAGAGAGTACTCGAGTACTCTCTGAACAAAGTTGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCAACTTTGTTCAGAGAGTACTCGAGTACTCTCTGAACAAAGTTGGC-3'

Other clones with same target sequence:

(none)