Construct: shRNA TRCN0000106989

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003529.2-42s1c1
DNA Barcode:
CAAGGCGCCACGCAAACAGTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
H3C1 (8350)
Gene Description:
H3 clustered histone 1
Transcript:
RefSeq NM_003529.2 (CURRENT)
Match location:
Position 42 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000106989)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAGGCGCCACGCAAACAGTT
Hairpin Sequence:
5'-CCGG-CAAGGCGCCACGCAAACAGTT-CTCGAG-AACTGTTTGCGTGGCGCCTTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAGGCGCCACGCAAACAGTTCTCGAGAACTGTTTGCGTGGCGCCTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAGGCGCCACGCAAACAGTTCTCGAGAACTGTTTGCGTGGCGCCTTG-3'

Other clones with same target sequence:

(none)