Construct: shRNA TRCN0000108249

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007234.3-508s1c1
DNA Barcode:
CAATGCTTCTCTCCAAGCAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
DCTN3 (11258)
Gene Description:
dynactin subunit 3
Transcript:
RefSeq NM_007234.3 (NON-CURRENT)
Match location:
Position 508 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000108249)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAATGCTTCTCTCCAAGCAAT
Hairpin Sequence:
5'-CCGG-CAATGCTTCTCTCCAAGCAAT-CTCGAG-ATTGCTTGGAGAGAAGCATTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAATGCTTCTCTCCAAGCAATCTCGAGATTGCTTGGAGAGAAGCATTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAATGCTTCTCTCCAAGCAATCTCGAGATTGCTTGGAGAGAAGCATTG-3'

Other clones with same target sequence:

  1. TRCN0000300956