Construct: shRNA TRCN0000108467

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_013610.1-316s1c1
DNA Barcode:
CCTGGTCAAGTATGACCTCAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ninj1 (18081)
Gene Description:
ninjurin 1
Transcript:
RefSeq NM_013610.1 (NON-CURRENT)
Match location:
Position 316 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000108467)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGGTCAAGTATGACCTCAA
Hairpin Sequence:
5'-CCGG-CCTGGTCAAGTATGACCTCAA-CTCGAG-TTGAGGTCATACTTGACCAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGGTCAAGTATGACCTCAACTCGAGTTGAGGTCATACTTGACCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGGTCAAGTATGACCTCAACTCGAGTTGAGGTCATACTTGACCAGG-3'

Other clones with same target sequence:

  1. TRCN0000316490