Construct: shRNA TRCN0000108483
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_008516.1-2107s1c1
- DNA Barcode:
- GAAATAAGATAACCGTGGAAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Lrrn1 (16979)
- Gene Description:
- leucine rich repeat protein 1, neuronal
- Transcript:
- RefSeq NM_008516.1 (NON-CURRENT)
- Match location:
- Position 2107 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000108483)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GAAATAAGATAACCGTGGAAA
- Hairpin Sequence:
-
5'-CCGG-GAAATAAGATAACCGTGGAAA-CTCGAG-TTTCCACGGTTATCTTATTTC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGAAATAAGATAACCGTGGAAACTCGAGTTTCCACGGTTATCTTATTTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGAAATAAGATAACCGTGGAAACTCGAGTTTCCACGGTTATCTTATTTC-3'
Other clones with same target sequence:
(none)
