Construct: shRNA TRCN0000108825

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009922.2-1404s1c1
DNA Barcode:
CGTTTGTAACTCGAACACATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cnn1 (12797)
Gene Description:
calponin 1
Transcript:
RefSeq NM_009922.2 (NON-CURRENT)
Match location:
Position 1404 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000108825)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGTTTGTAACTCGAACACATT
Hairpin Sequence:
5'-CCGG-CGTTTGTAACTCGAACACATT-CTCGAG-AATGTGTTCGAGTTACAAACG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGTTTGTAACTCGAACACATTCTCGAGAATGTGTTCGAGTTACAAACGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGTTTGTAACTCGAACACATTCTCGAGAATGTGTTCGAGTTACAAACG-3'

Other clones with same target sequence:

(none)