Construct: shRNA TRCN0000108965

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_018774.1-3377s1c1
DNA Barcode:
CCTCCAGATAGCAAGAGGTTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Phc2 (54383)
Gene Description:
polyhomeotic-like 2 (Drosophila)
Transcript:
RefSeq NM_018774.1 (NON-CURRENT)
Match location:
Position 3377 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000108965)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTCCAGATAGCAAGAGGTTT
Hairpin Sequence:
5'-CCGG-CCTCCAGATAGCAAGAGGTTT-CTCGAG-AAACCTCTTGCTATCTGGAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTCCAGATAGCAAGAGGTTTCTCGAGAAACCTCTTGCTATCTGGAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTCCAGATAGCAAGAGGTTTCTCGAGAAACCTCTTGCTATCTGGAGG-3'

Other clones with same target sequence:

(none)