Construct: shRNA TRCN0000109299
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_029933.3-3157s1c1
- DNA Barcode:
- CTCCATTATGATGTCTCGAAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Bcl9 (77578)
- Gene Description:
- B cell CLL/lymphoma 9
- Transcript:
- RefSeq NM_029933.3 (NON-CURRENT)
- Match location:
- Position 3157 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000109299)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CTCCATTATGATGTCTCGAAT
- Hairpin Sequence:
-
5'-CCGG-CTCCATTATGATGTCTCGAAT-CTCGAG-ATTCGAGACATCATAATGGAG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCTCCATTATGATGTCTCGAATCTCGAGATTCGAGACATCATAATGGAGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACTCCATTATGATGTCTCGAATCTCGAGATTCGAGACATCATAATGGAG-3'
Other clones with same target sequence:
(none)
