Construct: shRNA TRCN0000109461

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_008653.1-3665s1c1
DNA Barcode:
GCTCCATCATTGCAGGCTATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Mybpc3 (17868)
Gene Description:
myosin binding protein C, cardiac
Transcript:
RefSeq NM_008653.1 (NON-CURRENT)
Match location:
Position 3665 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000109461)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTCCATCATTGCAGGCTATA
Hairpin Sequence:
5'-CCGG-GCTCCATCATTGCAGGCTATA-CTCGAG-TATAGCCTGCAATGATGGAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTCCATCATTGCAGGCTATACTCGAGTATAGCCTGCAATGATGGAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTCCATCATTGCAGGCTATACTCGAGTATAGCCTGCAATGATGGAGC-3'

Other clones with same target sequence:

(none)