Construct: shRNA TRCN0000111041
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_176839.1-418s1c1
- DNA Barcode:
- CGAGGAGCATTCTAAGGGAAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Abcc5 (27416)
- Gene Description:
- ATP-binding cassette, sub-family C (CFTR/MRP), member 5
- Transcript:
- RefSeq NM_176839.1 (CURRENT)
- Match location:
- Position 418 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000111041)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CGAGGAGCATTCTAAGGGAAA
- Hairpin Sequence:
-
5'-CCGG-CGAGGAGCATTCTAAGGGAAA-CTCGAG-TTTCCCTTAGAATGCTCCTCG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCGAGGAGCATTCTAAGGGAAACTCGAGTTTCCCTTAGAATGCTCCTCGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACGAGGAGCATTCTAAGGGAAACTCGAGTTTCCCTTAGAATGCTCCTCG-3'
Other clones with same target sequence:
-
TRCN0000325250
