Construct: shRNA TRCN0000111613

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_175079.1-459s1c1
DNA Barcode:
GCAAATTCGTTCTCGACTATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cpne9 (211232)
Gene Description:
copine family member IX
Transcript:
RefSeq NM_175079.1 (NON-CURRENT)
Match location:
Position 459 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000111613)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAAATTCGTTCTCGACTATT
Hairpin Sequence:
5'-CCGG-GCAAATTCGTTCTCGACTATT-CTCGAG-AATAGTCGAGAACGAATTTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAAATTCGTTCTCGACTATTCTCGAGAATAGTCGAGAACGAATTTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAAATTCGTTCTCGACTATTCTCGAGAATAGTCGAGAACGAATTTGC-3'

Other clones with same target sequence:

(none)