Construct: shRNA TRCN0000112039

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_177301.3-1672s1c1
DNA Barcode:
CCTGAACCATTACCAGATGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hnrnpl (15388)
Gene Description:
heterogeneous nuclear ribonucleoprotein L
Transcript:
RefSeq NM_177301.3 (NON-CURRENT)
Match location:
Position 1672 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000112039)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGAACCATTACCAGATGAA
Hairpin Sequence:
5'-CCGG-CCTGAACCATTACCAGATGAA-CTCGAG-TTCATCTGGTAATGGTTCAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGAACCATTACCAGATGAACTCGAGTTCATCTGGTAATGGTTCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGAACCATTACCAGATGAACTCGAGTTCATCTGGTAATGGTTCAGG-3'

Other clones with same target sequence:

  1. TRCN0000287717