Construct: shRNA TRCN0000112088
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_010485.2-354s1c1
- DNA Barcode:
- CGAGGTTGAATCTGCAAAGCT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Elavl1 (15568)
- Gene Description:
- ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
- Transcript:
- RefSeq NM_010485.2 (NON-CURRENT)
- Match location:
- Position 354 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000112088)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CGAGGTTGAATCTGCAAAGCT
- Hairpin Sequence:
-
5'-CCGG-CGAGGTTGAATCTGCAAAGCT-CTCGAG-AGCTTTGCAGATTCAACCTCG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCGAGGTTGAATCTGCAAAGCTCTCGAGAGCTTTGCAGATTCAACCTCGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACGAGGTTGAATCTGCAAAGCTCTCGAGAGCTTTGCAGATTCAACCTCG-3'
Other clones with same target sequence:
-
TRCN0000308990
