Construct: shRNA TRCN0000112173
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_026508.1-894s1c1
- DNA Barcode:
- CCTTAATGGAAAGCGGATTAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Trap1 (68015)
- Gene Description:
- TNF receptor-associated protein 1
- Transcript:
- RefSeq NM_026508.1 (NON-CURRENT)
- Match location:
- Position 894 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000112173)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTTAATGGAAAGCGGATTAA
- Hairpin Sequence:
-
5'-CCGG-CCTTAATGGAAAGCGGATTAA-CTCGAG-TTAATCCGCTTTCCATTAAGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTTAATGGAAAGCGGATTAACTCGAGTTAATCCGCTTTCCATTAAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTTAATGGAAAGCGGATTAACTCGAGTTAATCCGCTTTCCATTAAGG-3'
Other clones with same target sequence:
-
TRCN0000339838
