Construct: shRNA TRCN0000112197

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_010477.2-1436s1c1
DNA Barcode:
CCTGCTAATGAAGACCAGAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hspd1 (15510)
Gene Description:
heat shock protein 1 (chaperonin)
Transcript:
RefSeq NM_010477.2 (NON-CURRENT)
Match location:
Position 1436 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000112197)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGCTAATGAAGACCAGAAA
Hairpin Sequence:
5'-CCGG-CCTGCTAATGAAGACCAGAAA-CTCGAG-TTTCTGGTCTTCATTAGCAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGCTAATGAAGACCAGAAACTCGAGTTTCTGGTCTTCATTAGCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGCTAATGAAGACCAGAAACTCGAGTTTCTGGTCTTCATTAGCAGG-3'

Other clones with same target sequence:

  1. TRCN0000314490