Construct: shRNA TRCN0000112626

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_177010.2-429s1c1
DNA Barcode:
GATAATAAAGCTCAGAGACTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
F630003A18Rik (319823)
Gene Description:
RIKEN cDNA F630003A18 gene
Transcript:
RefSeq NM_177010.2 (NON-CURRENT)
Match location:
Position 429 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000112626)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GATAATAAAGCTCAGAGACTT
Hairpin Sequence:
5'-CCGG-GATAATAAAGCTCAGAGACTT-CTCGAG-AAGTCTCTGAGCTTTATTATC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGATAATAAAGCTCAGAGACTTCTCGAGAAGTCTCTGAGCTTTATTATCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGATAATAAAGCTCAGAGACTTCTCGAGAAGTCTCTGAGCTTTATTATC-3'

Other clones with same target sequence:

(none)