Construct: shRNA TRCN0000112989

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001009818.1-1360s1c1
DNA Barcode:
CAAACCAAGAAGGACAAGGAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Sept11 (52398)
Gene Description:
septin 11
Transcript:
RefSeq NM_001009818.1 (NON-CURRENT)
Match location:
Position 1360 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000112989)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAACCAAGAAGGACAAGGAT
Hairpin Sequence:
5'-CCGG-CAAACCAAGAAGGACAAGGAT-CTCGAG-ATCCTTGTCCTTCTTGGTTTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAACCAAGAAGGACAAGGATCTCGAGATCCTTGTCCTTCTTGGTTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAACCAAGAAGGACAAGGATCTCGAGATCCTTGTCCTTCTTGGTTTG-3'

Other clones with same target sequence:

  1. TRCN0000326352