Construct: shRNA TRCN0000113008

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016667.1-1393s1c1
DNA Barcode:
CTGGTTGTTCTGACTGAGAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Sntb1 (20649)
Gene Description:
syntrophin, basic 1
Transcript:
RefSeq NM_016667.1 (NON-CURRENT)
Match location:
Position 1393 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000113008)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTGGTTGTTCTGACTGAGAAA
Hairpin Sequence:
5'-CCGG-CTGGTTGTTCTGACTGAGAAA-CTCGAG-TTTCTCAGTCAGAACAACCAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTGGTTGTTCTGACTGAGAAACTCGAGTTTCTCAGTCAGAACAACCAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTGGTTGTTCTGACTGAGAAACTCGAGTTTCTCAGTCAGAACAACCAG-3'

Other clones with same target sequence:

(none)