Construct: shRNA TRCN0000114558
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_028281.1-146s1c1
- DNA Barcode:
- CCAACTTATTCCTGGCTTGAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Pcbd2 (72562)
- Gene Description:
- pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
- Transcript:
- RefSeq NM_028281.1 (CURRENT)
- Match location:
- Position 146 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000114558)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAACTTATTCCTGGCTTGAA
- Hairpin Sequence:
-
5'-CCGG-CCAACTTATTCCTGGCTTGAA-CTCGAG-TTCAAGCCAGGAATAAGTTGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAACTTATTCCTGGCTTGAACTCGAGTTCAAGCCAGGAATAAGTTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAACTTATTCCTGGCTTGAACTCGAGTTCAAGCCAGGAATAAGTTGG-3'
Other clones with same target sequence:
-
TRCN0000326043
