Construct: shRNA TRCN0000114749

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_008670.1-2070s1c1
DNA Barcode:
CGTCTACTAGAGTTTATGGTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Naip1 (17940)
Gene Description:
NLR family, apoptosis inhibitory protein 1
Transcript:
RefSeq NM_008670.1 (NON-CURRENT)
Match location:
Position 2070 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000114749)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGTCTACTAGAGTTTATGGTT
Hairpin Sequence:
5'-CCGG-CGTCTACTAGAGTTTATGGTT-CTCGAG-AACCATAAACTCTAGTAGACG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGTCTACTAGAGTTTATGGTTCTCGAGAACCATAAACTCTAGTAGACGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGTCTACTAGAGTTTATGGTTCTCGAGAACCATAAACTCTAGTAGACG-3'

Other clones with same target sequence:

(none)