Construct: shRNA TRCN0000114929

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_008806.1-298s1c1
DNA Barcode:
CGCAATGGCATAGCTGAACTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Pde6b (18587)
Gene Description:
phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
Transcript:
RefSeq NM_008806.1 (NON-CURRENT)
Match location:
Position 298 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000114929)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGCAATGGCATAGCTGAACTT
Hairpin Sequence:
5'-CCGG-CGCAATGGCATAGCTGAACTT-CTCGAG-AAGTTCAGCTATGCCATTGCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGCAATGGCATAGCTGAACTTCTCGAGAAGTTCAGCTATGCCATTGCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGCAATGGCATAGCTGAACTTCTCGAGAAGTTCAGCTATGCCATTGCG-3'

Other clones with same target sequence:

(none)