Construct: shRNA TRCN0000115354
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_029548.1-551s1c1
- DNA Barcode:
- CCACAGAAACACAGCCTCCGA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Rph3al (380714)
- Gene Description:
- rabphilin 3A-like (without C2 domains)
- Transcript:
- RefSeq NM_029548.1 (NON-CURRENT)
- Match location:
- Position 551 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000115354)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCACAGAAACACAGCCTCCGA
- Hairpin Sequence:
-
5'-CCGG-CCACAGAAACACAGCCTCCGA-CTCGAG-TCGGAGGCTGTGTTTCTGTGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCACAGAAACACAGCCTCCGACTCGAGTCGGAGGCTGTGTTTCTGTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCACAGAAACACAGCCTCCGACTCGAGTCGGAGGCTGTGTTTCTGTGG-3'
Other clones with same target sequence:
(none)
