Construct: shRNA TRCN0000116164

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_025106.2-786s1c1
DNA Barcode:
GAACCAGATGAGACATTCATT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SPSB1 (80176)
Gene Description:
splA/ryanodine receptor domain and SOCS box containing 1
Transcript:
RefSeq NM_025106.2 (NON-CURRENT)
Match location:
Position 786 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000116164)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAACCAGATGAGACATTCATT
Hairpin Sequence:
5'-CCGG-GAACCAGATGAGACATTCATT-CTCGAG-AATGAATGTCTCATCTGGTTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAACCAGATGAGACATTCATTCTCGAGAATGAATGTCTCATCTGGTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAACCAGATGAGACATTCATTCTCGAGAATGAATGTCTCATCTGGTTC-3'

Other clones with same target sequence:

  1. TRCN0000288932