Construct: shRNA TRCN0000117085

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_138632.1-550s1c1
DNA Barcode:
CTCGGACTCTAACAAGGAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
TRIOBP (11078)
Gene Description:
TRIO and F-actin binding protein
Transcript:
RefSeq NM_138632.1 (NON-CURRENT)
Match location:
Position 550 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000117085)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTCGGACTCTAACAAGGAGAA
Hairpin Sequence:
5'-CCGG-CTCGGACTCTAACAAGGAGAA-CTCGAG-TTCTCCTTGTTAGAGTCCGAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTCGGACTCTAACAAGGAGAACTCGAGTTCTCCTTGTTAGAGTCCGAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTCGGACTCTAACAAGGAGAACTCGAGTTCTCCTTGTTAGAGTCCGAG-3'

Other clones with same target sequence:

  1. TRCN0000288921