Construct: shRNA TRCN0000117123
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_007203.3-2386s1c1
- DNA Barcode:
- GCATCCAATGAGACAACCAAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- PALM2AKAP2 (445815)
- Gene Description:
- PALM2 and AKAP2 fusion
- Transcript:
- RefSeq NM_007203.3 (NON-CURRENT)
- Match location:
- Position 2386 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000117123)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCATCCAATGAGACAACCAAT
- Hairpin Sequence:
-
5'-CCGG-GCATCCAATGAGACAACCAAT-CTCGAG-ATTGGTTGTCTCATTGGATGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCATCCAATGAGACAACCAATCTCGAGATTGGTTGTCTCATTGGATGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCATCCAATGAGACAACCAATCTCGAGATTGGTTGTCTCATTGGATGC-3'
Other clones with same target sequence:
-
TRCN0000153143
