Construct: shRNA TRCN0000117653
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_052969.1-437s1c1
- DNA Barcode:
- CAGATGAAACCTGGTAGTAAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- RPL39L (116832)
- Gene Description:
- ribosomal protein L39 like
- Transcript:
- RefSeq NM_052969.1 (NON-CURRENT)
- Match location:
- Position 437 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000117653)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CAGATGAAACCTGGTAGTAAA
- Hairpin Sequence:
-
5'-CCGG-CAGATGAAACCTGGTAGTAAA-CTCGAG-TTTACTACCAGGTTTCATCTG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCAGATGAAACCTGGTAGTAAACTCGAGTTTACTACCAGGTTTCATCTGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACAGATGAAACCTGGTAGTAAACTCGAGTTTACTACCAGGTTTCATCTG-3'
Other clones with same target sequence:
-
TRCN0000333228
