Construct: shRNA TRCN0000118046

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002499.1-312s1c1
DNA Barcode:
CGGTGGATACACTCTCAGTTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
NEO1 (4756)
Gene Description:
neogenin 1
Transcript:
RefSeq NM_002499.1 (NON-CURRENT)
Match location:
Position 312 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000118046)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGGTGGATACACTCTCAGTTA
Hairpin Sequence:
5'-CCGG-CGGTGGATACACTCTCAGTTA-CTCGAG-TAACTGAGAGTGTATCCACCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGGTGGATACACTCTCAGTTACTCGAGTAACTGAGAGTGTATCCACCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGGTGGATACACTCTCAGTTACTCGAGTAACTGAGAGTGTATCCACCG-3'

Other clones with same target sequence:

  1. TRCN0000349396