Construct: shRNA TRCN0000118094

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_032287.2-582s1c1
DNA Barcode:
CCATCTCCTCAATTACTTCAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
RTL6 (84247)
Gene Description:
retrotransposon Gag like 6
Transcript:
RefSeq NM_032287.2 (NON-CURRENT)
Match location:
Position 582 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000118094)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCATCTCCTCAATTACTTCAA
Hairpin Sequence:
5'-CCGG-CCATCTCCTCAATTACTTCAA-CTCGAG-TTGAAGTAATTGAGGAGATGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCATCTCCTCAATTACTTCAACTCGAGTTGAAGTAATTGAGGAGATGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCATCTCCTCAATTACTTCAACTCGAGTTGAAGTAATTGAGGAGATGG-3'

Other clones with same target sequence:

(none)