Construct: shRNA TRCN0000121112

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005424.2-3669s1c1
DNA Barcode:
CATGCTTTGTAGGTGTCTCAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
TIE1 (7075)
Gene Description:
tyrosine kinase with immunoglobulin like and EGF like domains 1
Transcript:
RefSeq NM_005424.2 (NON-CURRENT)
Match location:
Position 3669 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000121112)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CATGCTTTGTAGGTGTCTCAT
Hairpin Sequence:
5'-CCGG-CATGCTTTGTAGGTGTCTCAT-CTCGAG-ATGAGACACCTACAAAGCATG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCATGCTTTGTAGGTGTCTCATCTCGAGATGAGACACCTACAAAGCATGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACATGCTTTGTAGGTGTCTCATCTCGAGATGAGACACCTACAAAGCATG-3'

Other clones with same target sequence:

(none)