Construct: shRNA TRCN0000121469

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_013709.2-660s1c1
DNA Barcode:
GCAGCGCATCAATTTGAAGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Sh3yl1 (24057)
Gene Description:
Sh3 domain YSC-like 1
Transcript:
RefSeq NM_013709.2 (NON-CURRENT)
Match location:
Position 660 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000121469)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGCGCATCAATTTGAAGAA
Hairpin Sequence:
5'-CCGG-GCAGCGCATCAATTTGAAGAA-CTCGAG-TTCTTCAAATTGATGCGCTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGCGCATCAATTTGAAGAACTCGAGTTCTTCAAATTGATGCGCTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGCGCATCAATTTGAAGAACTCGAGTTCTTCAAATTGATGCGCTGC-3'

Other clones with same target sequence:

(none)