Construct: shRNA TRCN0000122024

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_015186.1-1160s1c1
DNA Barcode:
GCTTCTTGAATCAGTTGATAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
VPS13A (23230)
Gene Description:
vacuolar protein sorting 13 homolog A
Transcript:
RefSeq NM_015186.1 (NON-CURRENT)
Match location:
Position 1160 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000122024)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTTCTTGAATCAGTTGATAT
Hairpin Sequence:
5'-CCGG-GCTTCTTGAATCAGTTGATAT-CTCGAG-ATATCAACTGATTCAAGAAGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTTCTTGAATCAGTTGATATCTCGAGATATCAACTGATTCAAGAAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTTCTTGAATCAGTTGATATCTCGAGATATCAACTGATTCAAGAAGC-3'

Other clones with same target sequence:

(none)