Construct: shRNA TRCN0000122726
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_145294.3-1777s1c1
- DNA Barcode:
- CCAGGTTGTCAATGGCCTCAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- LOC197336 (197336)
- Gene Description:
- similar to RIKEN cDNA 3230401M21 [Mus musculus]
- Transcript:
- RefSeq NM_145294.3 (NON-CURRENT)
- Match location:
- Position 1777 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000122726)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAGGTTGTCAATGGCCTCAT
- Hairpin Sequence:
-
5'-CCGG-CCAGGTTGTCAATGGCCTCAT-CTCGAG-ATGAGGCCATTGACAACCTGG-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAGGTTGTCAATGGCCTCATCTCGAGATGAGGCCATTGACAACCTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAGGTTGTCAATGGCCTCATCTCGAGATGAGGCCATTGACAACCTGG-3'
Other clones with same target sequence:
(none)
