Construct: shRNA TRCN0000122781

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_012388.2-681s1c1
DNA Barcode:
GCAACGAGAGAAGGAGTTTGA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
BLOC1S6 (26258)
Gene Description:
biogenesis of lysosomal organelles complex 1 subunit 6
Transcript:
RefSeq NM_012388.2 (NON-CURRENT)
Match location:
Position 681 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000122781)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAACGAGAGAAGGAGTTTGA
Hairpin Sequence:
5'-CCGG-GCAACGAGAGAAGGAGTTTGA-CTCGAG-TCAAACTCCTTCTCTCGTTGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAACGAGAGAAGGAGTTTGACTCGAGTCAAACTCCTTCTCTCGTTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAACGAGAGAAGGAGTTTGACTCGAGTCAAACTCCTTCTCTCGTTGC-3'

Other clones with same target sequence:

(none)