Construct: shRNA TRCN0000123023

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001233.3-521s1c1
DNA Barcode:
CCGGCTCAACTCGCATCTCAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CAV2 (858)
Gene Description:
caveolin 2
Transcript:
RefSeq NM_001233.3 (NON-CURRENT)
Match location:
Position 521 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000123023)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGGCTCAACTCGCATCTCAA
Hairpin Sequence:
5'-CCGG-CCGGCTCAACTCGCATCTCAA-CTCGAG-TTGAGATGCGAGTTGAGCCGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGGCTCAACTCGCATCTCAACTCGAGTTGAGATGCGAGTTGAGCCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGGCTCAACTCGCATCTCAACTCGAGTTGAGATGCGAGTTGAGCCGG-3'

Other clones with same target sequence:

(none)