Construct: shRNA TRCN0000123134
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_002859.1-2161s1c1
- DNA Barcode:
- CCCGACCTAATTGTCTTTGTT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- PXN (5829)
- Gene Description:
- paxillin
- Transcript:
- RefSeq NM_002859.1 (NON-CURRENT)
- Match location:
- Position 2161 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000123134)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCCGACCTAATTGTCTTTGTT
- Hairpin Sequence:
-
5'-CCGG-CCCGACCTAATTGTCTTTGTT-CTCGAG-AACAAAGACAATTAGGTCGGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCCGACCTAATTGTCTTTGTTCTCGAGAACAAAGACAATTAGGTCGGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCCGACCTAATTGTCTTTGTTCTCGAGAACAAAGACAATTAGGTCGGG-3'
Other clones with same target sequence:
-
TRCN0000286554
