Construct: shRNA TRCN0000123558
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_152946.1-190s1c1
- DNA Barcode:
- CGCTTTGATGTTCGTGCACAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Clasrp (53609)
- Gene Description:
- CLK4-associating serine/arginine rich protein
- Transcript:
- RefSeq NM_152946.1 (NON-CURRENT)
- Match location:
- Position 190 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000123558)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CGCTTTGATGTTCGTGCACAT
- Hairpin Sequence:
-
5'-CCGG-CGCTTTGATGTTCGTGCACAT-CTCGAG-ATGTGCACGAACATCAAAGCG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCGCTTTGATGTTCGTGCACATCTCGAGATGTGCACGAACATCAAAGCGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACGCTTTGATGTTCGTGCACATCTCGAGATGTGCACGAACATCAAAGCG-3'
Other clones with same target sequence:
-
TRCN0000287219
