Construct: shRNA TRCN0000123577

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_024183.3-1668s1c1
DNA Barcode:
CGTCGCCATGAAAGTGAAGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Fip1l1 (66899)
Gene Description:
FIP1 like 1 (S. cerevisiae)
Transcript:
RefSeq NM_024183.3 (NON-CURRENT)
Match location:
Position 1668 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000123577)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGTCGCCATGAAAGTGAAGAA
Hairpin Sequence:
5'-CCGG-CGTCGCCATGAAAGTGAAGAA-CTCGAG-TTCTTCACTTTCATGGCGACG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGTCGCCATGAAAGTGAAGAACTCGAGTTCTTCACTTTCATGGCGACGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGTCGCCATGAAAGTGAAGAACTCGAGTTCTTCACTTTCATGGCGACG-3'

Other clones with same target sequence:

  1. TRCN0000332096